BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022D05SP1|AL427894
(1012 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1407 1738 0.0
>3x_Contig1407
Length = 9823
Score = 1738 bits (864), Expect = 0.0
Identities = 887/908 (97%)
Strand = Plus / Plus
Query: 1 gatcgtcagtsagaatatgtggtttcaaagggtaacaaagtcagamatgggcatttacac 60
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 8905 gatcgtcagtgagaatatgtggtttcaaagggtaacaaagtcagaaatgggcatttacac 8964
Query: 61 tggatgcsatgatttattatgcgtatgtmttatatatytsamtacatactagatatctgg 120
||||||| |||||||||||||||||||| |||||||| | | ||||||||||||||||||
Sbjct: 8965 tggatgcgatgatttattatgcgtatgtattatatatttgaatacatactagatatctgg 9024
Query: 121 tatcgtgtcatttaacaaaaagccattatttcaagattcgactatatacgggctttgcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9025 tatcgtgtcatttaacaaaaagccattatttcaagattcgactatatacgggctttgcac 9084
Query: 181 atagataamaggtcggttcaagaaaaasaaaatyaamagttcgactagaccaggtagttt 240
|||||||| |||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 9085 atagataaaaggtcggttcaagaaaaagaaaattaaaagttcgactagaccaggtagttt 9144
Query: 241 ccttctcccagcagtctatgattttstaggttatggatggattctctaaacgcagccttc 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 9145 ccttctcccagcagtctatgattttgtaggttatggatggattctctaaacgcagccttc 9204
Query: 301 attctgtcgttacctagtaaagtttttgccatccaagttcttaagtyttcggataccgtt 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 9205 attctgtcgttacctagtaaagtttttgccatccaagttcttaagttttcggataccgtt 9264
Query: 361 tccgagatatgatgaatcttgttaccgtctctcccaaattggaatgcyaggaacgcagat 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9265 tccgagatatgatgaatcttgttaccgtctctcccaaattggaatgctaggaacgcagat 9324
Query: 421 gataggataaccatgacgggaatccagaagamaatcaacatcttatcgtttctsamgttt 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||
Sbjct: 9325 gataggataaccatgacgggaatccagaagaaaatcaacatcttatcgtttctgaagttt 9384
Query: 481 tggcgttgttggaagaatctgttcaatcttacttgtmgggcttcttcttcatcctcggac 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 9385 tggcgttgttggaagaatctgttcaatcttacttgtagggcttcttcttcatcctcggac 9444
Query: 541 gtttctgamgtttgagaatcgtgtgaatccggagcagtatcgacactsgcctctctgacg 600
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9445 gtttctgaagtttgagaatcgtgtgaatccggagcagtatcgacactggcctctctgacg 9504
Query: 601 atagacaggctcaattcggtgaccttgttcttgcttgtgttcaatccagatactgggaat 660
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9505 atagagaggctcaattcggtgaccttgttcttgcttgtgttcaatccagatactgggaat 9564
Query: 661 aaatcttcatatttaggtagtccttctggagtacgagccgacctgtcgccttcttgctct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9565 aaatcttcatatttaggtagtccttctggagtacgagccgacctgtcgccttcttgctct 9624
Query: 721 tcaccgttatcctggcttaattcttccgatggcttgactgtcgtaccagtgccgtctgct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9625 tcaccgttatcctggcttaattcttccgatggcttgactgtcgtaccagtgccgtctgct 9684
Query: 781 ctgtagggatgcacatatgtcgagagttgcaactgggattcccgctgagcaatggttagt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9685 ctgtagggatgcacatatgtcgagagttgcaactgggattcccgctgagcaatggttagt 9744
Query: 841 gaagtatcgtcctgtacttcatcgtccaattcactcatttcgtcataaccactgaattcg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9745 gaagtatcgtcctgtacttcatcgtccaattcactcatttcgtcataaccactgaattcg 9804
Query: 901 tactctga 908
||||||||
Sbjct: 9805 tactctga 9812
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5273
Number of Sequences: 1807
Number of extensions: 5273
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 1012
length of database: 10,358,551
effective HSP length: 16
effective length of query: 996
effective length of database: 10,329,639
effective search space: 10288320444
effective search space used: 10288320444
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)